SE3020837

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_974
  • Malus domestica
  • SE3020837
  • Mutator
  • MadM8
  • MDC017050.157:3395-3570
  • GTGGTATTT
  • GGTATTTGAGCAATGTTAGGGAGACCAAATTGCAAACCAAATGATGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
GT      -    C                   ----------------       C          -------  ACCAATAAGAAACAAGCATGATAA
  GGTATT TGAG AATGTTAGGGAGACCAAAT                TGCAAAC AAATGATGTG       TC                        
  |||||| |||| |||||||||||||||||||                ||||||| ||||||||||       ||                        T
  TTATGG GCTC TTATAATCCCTCTGGTTTA                ACGTTTG TTTACTATAC       TA                        
 T      T    A                   AAAAAATTTGGTTTAA       A          CAACATT  CTAACCTAATAATTAATTAACAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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