SE3020854

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_991
  • Malus domestica
  • SE3020854
  • Mutator
  • MadM11
  • MDC013187.316:486-648
  • ATATATTAG
  • ATATATTAGGGGTGTGATATCTATACACCTCATTTTATTTCTTACACACCTTTTTAATTT

Secondary structure and sequence

TSD    TIR
5'



3'
       T         A          C  C                      -T      TCGAC   CG    AGATGAA
 ATATAT AGGGGTGTG TATCTATACA CT ATTTTATTTCTTACACACCTTT  TAATTT     CGT  GATC       
 |||||| ||||||||| |||||||||| || ||||||||||||||||||||||  ||||||     |||  ||||       T
 TATATA TCCCTACAC ATAGGTGTGT GA TAAAATGAAGAGTGTGTGGAAA  ATTAAA     GCA  CTAG       
T      -         G          A  A                      CT      TACAA   -A    AAGAAGT

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End