SE3020856

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_993
  • Malus domestica
  • SE3020856
  • Mutator
  • MadM11
  • MDC000910.324:18174-18337
  • AAAATAAAG
  • AGGGGTGTGATATCCACACACCTTTTTTTACTTCTCACACACCCTT

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAATAA         A                                    TTCAT    -GG          GGATGAA
       AGGGGTGTG TATCCACACACCTTTTTTTACTTCTCACACACCCTT     TTTC   CCGTTGGATC       
       ||||||||| ||||||||||||||||||||||||||||||||||||     ||||   ||||||||||       A
       TCCCCACAC ATAGGTGTGTGGGGAAAAATGAAGAGTGTGTGGGAA     AAAG   GGCAATCTAG       
AATAAAA         G                                    CAATT    ATA          AAGAAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End
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