SE3020871

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1008
  • Malus domestica
  • SE3020871
  • Mutator
  • MadM21
  • MDC009940.479:10716-10847
  • AATTAAAAG
  • GGGAAGTGTTATTGGCACTCCAAAAATCTCATTCTACACTYTCACAA

Secondary structure and sequence

TSD    TIR
5'



3' 
AATTAAAA     G                                CTY  A   GTGTA       TTT
        GGGAA TGTTATTGGCACTCCAAAAATCTCATTCTACA   TC CAA     ATTTTCT   
        ||||| ||||||||||||||||||||||||||||||||   || |||     |||||||    
        CCCTT ACAATAACCGTGAGGTTTTTAGAGTAAGATGT   AG GTT     TGAAAGG   
AAAATTAA     A                                --T  -   -----       TTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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