SE3020900

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1037
  • Malus domestica
  • SE3020900
  • Mutator
  • MadM132
  • MDC015243.154:14904-15066
  • TAATTTCTT
  • TTGGGTGGTGCTATCCACACACCCATTTTTACRTCTCACACACCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATTTC     -     C   C         AT      R       C    ------------C    -- ATTTTCYACCGTGAGAT
       TTGGG TGGTG TAT CACACACCC  TTTTAC TCTCACA ACCC             TCTC  A                 
       ||||| ||||| ||| |||||||||  |||||| ||||||| ||||             ||||  |                 C
       AATCC ACCAC ATA GTGTGTGGG  AAAATG AGGGTGT TGGG             AGTT  C                 
 TTCTTT     R     A   T         --      G       A    AACAATTAAAACC    AA TAGAAGAATTTAGCAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3