SE3020901

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1038
  • Malus domestica
  • SE3020901
  • Mutator
  • MadM9
  • MDC010418.208:169-410
  • GGGATAGGT
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
GGGATAGGTGAATGAGCATGA     AGATCCTTTTTGTGAGGATTTCAGGGATCCTTCAATCGTGTTCGTTTATCATATATCATGCGGTTGGTTTTCGTTACGTACTGTTTATATTCAATTTTAAATA
                     TCTCC                                                                                                       
                     |||||                                                                                                       T
                     TAGGG                                                                                                       
                 TGGA     TTTACCCCTAGGAGAGGCCTAGGAGAAACACTCCTAGGGCTCTTAGGAGGTTAGCATAGACAAGTAGCATGTAGCACGCCAGTCTTTAGCAACATTAAAAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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