SE3020913

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1050
  • Malus domestica
  • SE3020913
  • Mutator
  • MadM21
  • MDC014009.258:4875-5010
  • TTGGCAAGG
  • TGGCAAGGGAATTGTTATTAGCACTCCAAAAATCTTATTTGGCACTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
T  G   -                   C A            G       AAA   TTTATAATTAGAAA
 TG CAA GGGAATTGTTATTAGCACT C AAAATCTTATTT GCACTCC   CTT              
 || ||| ||||||||||||||||||| | |||||||||||| |||||||   |||               
 AC GTT CCCTTGACAATAATTGTGA G TTTTAGAGTAAG TGTGAGG   GTG              
   G   A                   A C            A       --A   TTTCACGTAAAAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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