SE3020914

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1051
  • Malus domestica
  • SE3020914
  • Mutator
  • MadM12
  • MDC004836.333:3985-4195
  • GTTTTTAAG
  • AAGGGAAAAGGATCCTCGC

Secondary structure and sequence

TSD    TIR
5'



3' 
GTTTTT  G                ------CA     TTTTCCTATGGATCCTGTGATCTCACTCGTTCATCGTATATCGTGCGGTCAGTTTTTTATTAMGTACTAT
      AA GGAAAAGGATCCTCGC        GATCC                                                                      
      || ||||||||||||||||        |||||                                                                      T
      TT CCTTTTCCTAGGAGCG        GGCAC                                                                      
GAATTT  G                ATCCCTAA     TAGAATAAGCAAATAGCATATAGCACGCCAGTCTTTAGTAAAATTTTTAATTTTAAATTTTAATCTATAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3