SE3020919

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1056
  • Malus domestica
  • SE3020919
  • Mutator
  • MadM36
  • MDC004578.361:8007-8168
  • TAAATTATT
  • GAGTAATGCTAAAGAGATTAAATTAGCAAACTAAATGATGTGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAATTATT           AA           -AGC                CATCAATAGAA    GCAC      CA  CCT
         GAGTAATGCTA  GAGATTAAATT    AAACTAAATGATGTGT           ATGA    GTTTAT  AC   
         |||||||||||  |||||||||||    ||||||||||||||||           ||||    ||||||  ||    
         CTCATTACGAT  CTCTGATTTAA    TTTGATTTATTGTACA           TACT    TAAATA  TG   
TTATTAAAT           CC           AATT                -----TTCAAG    -AAT      -A  AAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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