SE3020938

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1075
  • Malus domestica
  • SE3020938
  • Mutator
  • MadM11
  • MDC004418.146:1346-1511
  • TAAATATTA
  • AATATTAGGGGTGTGATATCCACACACCCCATTTTACTTCTCACACACCTTTTTAATTTTCGGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA      -         A             C                       --       CG   GTCG    GGATGAA
  AATATT AGGGGTGTG TATCCACACACCC ATTTTACTTCTCACACACCTTTT  TAATTTT  GTC    GATC       
  |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||  |||    ||||       T
  TTATAA TCCCCACAC ATAGGTGTGTGGG TAAAATGAAGAGTGTGTGGGGAA  ATTAAAA  CAG    CTAG       
 A      A         G             A                       CT       -A   ACAA    AAGAAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3