SE0350013

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1092
  • Arabidopsis thaliana
  • SE0350013
  • PIF/harbinger
  • To4
  • chr5:1518775-1519046
  • TTA
  • AGGGCATCTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT   G      CATCCA    -   --- CCACAAAGTTTTTCAAACAAAAAAAATATTAATATTATATTATAATTTGATTATTTGATTAAAAAAATATTTTTGTTAAAAAATTAAACCAATAGTAAGATGATAATTGT
  AGG CATCTC      TGAA AAA   C                                                                                                              
  ||| ||||||      |||| |||   |                                                                                                              C
  TCT GTAGAG      TAAC CTC   G                                                                                                              
AT   G      -----A    C   ATA AGTATTCTCAAAGAGTGTTAATTTTTTTATTTTTATTACTTTTACTTCCTCTCTCTCACATCTTTCAAAGAGTGAACTCTTTGAGACTCTATCAGAGATGTTGGGTAGTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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