SE0350035

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1114
  • Arabidopsis thaliana
  • SE0350035
  • PIF/harbinger
  • To11
  • chr2:10541971-10542202
  • TTA
  • GCAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
      TTAGA     ---   AACGTATAGGATTCATATAGTTTCTAAAAAAACAAAAAGTATTAATATTTTACTTTCATATCAAAAAAACAGAAAAATCAACATATAGGAATTGTATA
           GCAGC   TCC                                                                                                  
           |||||   |||                                                                                                  A
           CGTCG   TCA                                                                                                  
ATTCTGGTTGA     CCA   AAGAATCATCTTTGAGTATGTTAATTTTTTTTATTTTTATAAATTTACAATTCTTTTTCAACTCTCTCTTAGAGATTTTAAGGATTAAAATCCTAGCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3