SE2330021

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1140
  • Musa acuminata
  • SE2330021
  • hAT
  • Hat2
  • chrUn_random:119503897-119504154
  • ATTAGAAG
  • CATGGTTTGCAGTACC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTAGAAG  T                C         ----  GTACGGGCGGTACGTACCGGTCCGACAGACTTTCGGTACGCGGATCATATGTTACCGTTCCGACACTGTAGCTGTACTGTAGCACTGC
        CA GGTTTGCAGTACCGGT CGTACCGCC    CG                                                                                        
        || |||||||||||||||| |||||||||    ||                                                                                        T
        GT CCAAGCGTTATGGCAT GGCATGGCC    AG                                                                                        
GAAGATTA  T                -         TCAA  CTAGACCCGAGCTATGGCCATGTCATGCCATATGGCGAGCCATGTGGGTCCACATGGCTCGCCATATAAGTCCGCACGGCTCGTGACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3