SE2330041

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1160
  • Musa acuminata
  • SE2330041
  • hAT
  • Hat2
  • chr9:28789793-28790013
  • CTTCAAAC
  • CATGGTTTGCAGTACCGGTCCG

Secondary structure and sequence

TSD    TIR
5'



3' 
CTTCAAAC  T              GT   --A  CGCCCGGTACGGGCGGTACGTACCGGTCCGACAGGCTTCCGGTACGCGGACCGCATGTTACCGGTCCGGTACTGTA
        CA GGTTTGCAGTACCG  CCG   AC                                                                            
        || ||||||||||||||  |||   ||                                                                            G
        GT CCAAGCGTTATGGC  GGC   GC                                                                            
CAAACTTC  T              AT   ATG  CTCAAAGCTGGACCCGAGCCATGGCCATGCCATGCCATATGGCGAGCCATGTGGGTCCACATGACGATGTCATGAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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