SE2330068

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1187
  • Musa acuminata
  • SE2330068
  • hAT
  • Hat8
  • chr3:6119562-6119772
  • ATTATCAT
  • ATCAGGGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTATC         CGTCATTTTGA       A  CATCTTGGAGATTTGTTGGTATGGTACATATCGATTTGTATCAGTGTACCAACACATGGTATGTCGGGGCATG
      ATCAGGGTT           GTATCGG CC                                                                         
      |||||||||           ||||||| ||                                                                         C
      TAGTTCCAA           CATGGCG GG                                                                         
TATTAT         -------AGAA       -  CTCAACTATATCATACTCGTCATGCATGGTCCGGCTGAGCGGTGGCTCTGCACCGAGTGAGCTCAGGGACAGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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