SE2330087

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1206
  • Musa acuminata
  • SE2330087
  • hAT
  • Hat1
  • chr2:1799711-1800008
  • CTTGGTAC
  • GTACCAA

Secondary structure and sequence

TSD    TIR
5'



3' 
CTTG           TGCAATACCGTACCGTACCGGTATTTCGAGGTTGACTCGGTACGATACGGTACCAGCATGCCGAGCGGTACACCAGGGCATACCAAATGGTACACTAGGGCTTACCGAGCGATTACCTCTTATTGTAGCACTGTAG
    GTACCAAGGTA                                                                                                                                        
    |||||||||||                                                                                                                                         
    CATGGTTCGTA                                                                                                                                        
               CCATACGTTAAAGCTTACCATGGCGGGCCATGCCCGCCATACATGACCAGACTACCGTATGGCCATGCGCCTGGCGGGCGATGGCCTGCCTGGCACGAAGTCAAGATGTCATTATGTGACATCGTCAAGATGTCAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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