SE2330093

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1212
  • Musa acuminata
  • SE2330093
  • hAT
  • Hat2
  • chrUn_random:30183580-30183854
  • GCTGAATA
  • CATGGTTTGCAGTAC

Secondary structure and sequence

TSD    TIR
5'



3' 
GCTGAATA  T                C        ------   GTACGGGCGGTACGTACCGGTCCGACAGACTTTCGGTACGCGGACAATATGTTACCGTTCCGACACTGTAGCATTACTGTAGCATACTGTAGAACT
        CA GGTTTGCAGTACCGGT CGTACCGC      CCG                                                                                                
        || |||||||||||||||| ||||||||      |||                                                                                                 
        GT CCAAGCGTTATGGCAT GGCATGGC      GCT                                                                                                
ATAAGTCG  T                -        CTCAAA   AGACCCGAGCCATAGCCATGCCATGCCATATGGCGAGCCATGTGGGTTCACATGGCTGCCATATAAGTCCGCACGGCTCGTGACATCGTCACGATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3