SE2330099

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1218
  • Musa acuminata
  • SE2330099
  • hAT
  • Hat1
  • chr8:24276069-24276304
  • GTTTGTAT
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
    GTT     - AAG     CA     --           GTATTTCAACCTGGGCTCGGTACCGGTATGGTACGGTATACCGAGCGGTACACTCAGGTGTGCCGAGTACTGTAGCACTGC
       TGTAT C   GTTCG  ATACC  GTACCGTACCG                                                                                 
       ||||| |   |||||  |||||  |||||||||||                                                                                  
       GGTCC A   ACGGC  TGGCT  ACATGGCGGGC                                                                                 
TATGTTT     C --G     -A     TG           CATGCCCGCCATGTATGGCCAGGCTGTCCAACAGCCATGCGTCTGGCAGAGAATGGCCAGGCTCACGTGACATAGTGACAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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