SE2330106

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1225
  • Musa acuminata
  • SE2330106
  • hAT
  • Hat2
  • chr8:31968306-31968511
  • CTATGAAG
  • AGCAAGGTTCGCC

Secondary structure and sequence

TSD    TIR
5'



3' 
CTATGA    A    C                       TTCGACCCGCGCTCGGTACGGTACGGTACGGGTGTACCGAGCACTGTAGCAGTACGGCTACAGT
      AGCA GGTT GCCGTACCGTACCGTACCGGCGT                                                                
      |||| |||| |||||||||||||||||||||||                                                                 
      TCGT CCAA CGGCATGGCTTGTCATGGCGGGC                                                                
GAAGTA    A    A                       CATGCCCGCCATGCATGGCCAGGCTGTCTGAAAGCCATGCGCCTGGCAGAGAATGGCAAGGCCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3