SE2330110

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1229
  • Musa acuminata
  • SE2330110
  • hAT
  • Hat4
  • chr7:5399351-5399629
  • GTCTCATC
  • CCAAGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
GTCTCAT       T      -     -- -        ACGTTTCGACCCGAGCTTGGTATGGTACGGTACCAGTGTACCGGGCGATACATCAGGGCGTACCGAGCGGTATACCCTGGTGTACCGAACAATTTTTACTTTT
       CCAAGGT CGCTGT ACCGT  A CCATACCG                                                                                                       
       ||||||| |||||| |||||  | ||||||||                                                                                                        
       GGTTCCA GACGGT TGGCT  G ATGGCGGG                                                                                                       
CTACCCT       -      A     TC C        CATGACCCGCCATACATAGCCAGGCTGTCCAAAGACCATACACCTGGCGAGCCATGACGATATCACGATGTCATGATATGACATCATGACGACGTCATACTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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