SE2520037

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1267
  • Brachypodium distachyon
  • SE2520037
  • Mutator
  • M2
  • Bd1:52570386-52570593
  • ATATCATAA
  • ATATC

Secondary structure and sequence

TSD    TIR
5'



3' 
          ATAA  GAG  T        C  T  C                        AACAATC      ATCCAATC   - TTTTCTTATCCATCGGGCTTACAATAA
     ATATC    GG   TG CTATTTCT AG CG CTAAGAAATAGTTATTTCTCAGTC       GTAGCC        AAG A                           
     |||||    ||   || |||||||| || || ||||||||||||||||||||||||       ||||||        ||| |                            
     TATAG    CC   AC GATAAAGA TC GC GATTCTTTATTGATAAAGAGTTAG       TTGTTG        GAA A                           
AATAC     ----  AAA  -        A  C  T                        -CTATTA      --------   A CTAAGTTAGTGACTCTAAGTACATTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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