SE2520050

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1280
  • Brachypodium distachyon
  • SE2520050
  • Mutator
  • M10
  • Bd1:10991808-10991948
  • ACGTCACCC
  • ACGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
          ACCCC    T     G    A TT        A            G     T        TCATGG
     ACGTC     GGCG GGATT TCTG C  TAAGTCAC TGACTTTGTGTG CTGAC TGTGGGTC      
     |||||     |||| ||||| |||| |  |||||||| |||||||||||| ||||| ||||||||       
     TGCAG     CCGT CCTAA AGAC G  ATTCAGTG ACTGAAACACAC GACTG GCGCCCGG      
CCCAC     -----    T     G    - TC        G            A     C        TCTGTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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