SE2520090

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1320
  • Brachypodium distachyon
  • SE2520090
  • Mutator
  • M15
  • Bd1:9242700-9242926
  • TTAAATTAA
  • TAAATTAAGGGTGTGGCTATATATAAGTTGCCTGATTTTTA

Secondary structure and sequence

TSD    TIR
5'



3' 
T   A    G   GTG       A                  --------   AAAAGGCTTAAATCTAAGTTGAACAATCAGAGCCGTTAGATTAGTATCTAGATCTCATTTACCC
 TAA TTAA GGT   GCTATAT TAAGTTGCCTGATTTTTA        AGC                                                                
 ||| |||| |||   ||||||| ||||||||||||||||||        |||                                                                T
 ATT AATT CCA   CGATATA ATTCAACGGACTAAAAAT        ATT                                                                
A   A    G   AAA       G                  CAATCTAT   CAACTAAAGAGTCGGCAACCTATACTAAACACGAAATTCTAAACTTTGTATACTACTTTTTTTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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