SE2550132

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1362
  • Brachypodium distachyon
  • SE2550132
  • PIF/harbinger
  • To11
  • Bd3:8901731-8901904
  • TTA
  • AGGCTCCGTTTGGCATTGC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT      C            -----------     ATTATCATAATCCCGTTTTTCCCACCCGCTTTTCACTATTTTCGTGTTTGACTAA
  AGGCTC GTTTGGCATTGC           GGTGG                                                       
  |||||| ||||||||||||           |||||                                                       C
  TCCGAG CAAACCGTAACG           CGCGA                                                       
AT      T            ACTTGACACGA     CTTGAATAAAATATTAGACGACACTTTTATATGTGTGCTTACATCCTTTTTCAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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