SE2550187

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1417
  • Brachypodium distachyon
  • SE2550187
  • PIF/harbinger
  • To20
  • Bd3:22675476-22675817
  • TTA
  • AGGGCATGTACAATGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                --       TCAGCCTTCTCTTAGCGATGCCACATAGGATAAAATCTGATGTGGAAGAGAGAAAAACGAAGAAAATGCACAAGCCTTCTCTTAATTAAGAGATGATCTCTTCACAAGAATGATAAGGCAAAGATAAGGCAAATTTATCATTGTA
  AGGGCATGTACAATGG  GGTGACG                                                                                                                                                 
  ||||||||||||||||  |||||||                                                                                                                                                  
  TCCCGTACATGTTACC  CTATTCT                                                                                                                                                 
AT                AA       GACAGAATAGAATCCGTAAGGTGCAGTTAATCTTTTCTGTTGTTTTGTACAACATGTTACCCAATAGAGAATCACAAGATAGAATCTTAATTACAAATCTACTTATTTTAATTGATTTATTTACAATTTTTTTCTACTTTAAATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3