SE2550195

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1425
  • Brachypodium distachyon
  • SE2550195
  • PIF/harbinger
  • To9
  • Bd5:4794753-4794991
  • ATC
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
ATCGG    --     GTTTGCTACCAAAACATACCAAGCCAATTTTTTGGTCATTGACCAAAATTTGGTGTTTGTTTTGATGGTGACCAAATATATGGCTAGCCAATGTTTCATAGCCAA
     GTGT  GTTTG                                                                                                         
     ||||  |||||                                                                                                          
     CCCG  AAACC                                                                                                         
 CTAC    AC     AAACTCGGGTTTCAACGGGATGGTTTCTAAACCAATCGGTTTGTTAACCACTACCAAAACGATCGGGTACTCAATCGGTTTAAACCGGTTTTTAAACTTGATTTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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