SE2550219

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1449
  • Brachypodium distachyon
  • SE2550219
  • PIF/harbinger
  • To11
  • Bd3:4080443-4080616
  • TAA
  • AGGCTTAGTTTGGCATTGC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA     TA            ---- G    GTGCTGCCCTGAACTTATTTTATAATCTGCTGTTGAAAAATACACATGAAAACAGGAA
  AGGCT  GTTTGGCATTGC    T AACT                                                          
  |||||  ||||||||||||    | ||||                                                          A
  TCCGA  CAAACCGTAACG    C TAAT                                                          
AA     CA            CCAC -    ACTATTAGTTCGAAAAGGTTGGCCGAAAACCGATAGAAGAACAAACCGTTTGGTTGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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