SE2520286

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1516
  • Brachypodium distachyon
  • SE2520286
  • Mutator
  • M26
  • Bd2:35060803-35060943
  • CCTTTTCAG
  • GGGAGAAGGATTCAGTGACGTAACTGCACGTGACTTTGGGTGGCTGACACGTGGGTCCCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
CCTTTTCA            C     C   A    A G         G         C     T  C  GG
        GGGAGAAGGATT AGTGA GTA CTGC C TGACTTTGG TGGCTGACA GTGGG CC AC  
        |||||||||||| ||||| ||| |||| | ||||||||| ||||||||| ||||| || ||  C
        CCCTCTTCCTAG TCACT CAT GACG G ACTGAAACC ACCGACTGT CACCC GG TG  
GACTTTTC            C     T   -    G G         A         A     -  T  AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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