SE2510355

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1585
  • Brachypodium distachyon
  • SE2510355
  • Tc1/Mariner
  • St10
  • Bd3:22828235-22828495
  • TA
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
TAC                   -     G -   ATTACATTTAT    ACGCTTTTTAGGCATAGATACATCCATATTTGAGCAAATTTGAGACAATTAATATGGATCGGAGGGATTACTAAATTTGTACTAAATCT
   TCCCTCCGATCCATATTAA TTGTC A AAT           CTAG                                                                                         
   ||||||||||||||||||| ||||| | |||           ||||                                                                                         G
   ATGAGGGAGGCAGGGTATA TTTAC T AGT           TAAA                                                                                         
                      A     - A   ----------T    CGGGTTTATACTTACATAGATACGGATTTTTCGCAAATTTATGTACATTATCTTTCAGTGAAGTATACTCTGCCTCCCTCATTTACAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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