SE2510417

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1647
  • Brachypodium distachyon
  • SE2510417
  • Tc1/Mariner
  • St16
  • Bd3:44264301-44264416
  • TA
  • TACTCCCTCCGTCCAACAAAAAATGTCTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
                    AA        AGTTTGTCAAAA       A      A    GAT
TACTCCCTCCGTCCAACAAA  ATGTCTCA            TTTGAAT TATCTA ACAT   
||||||||||||||||||||  ||||||||            ||||||| |||||| ||||    
ATGAGGGAGGCAGGTTGTTT  TACAGAGT            AAACTTA GTAGAT TGTG   
                    AC        ------------       C      A    ATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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