SE2510476

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1706
  • Brachypodium distachyon
  • SE2510476
  • Tc1/Mariner
  • St10
  • Bd5:15855799-15855915
  • TA
  • TACTCCCTCCGTCCCATATTAAGTGAC

Secondary structure and sequence

TSD    TIR
5'



3' 
                           TCAAATTTGTCC      -GA         T  T AA
TACTCCCTCCGTCCCATATTAAGTGAC            AAATAT   ATGTATCTA AC C  
|||||||||||||||||||||||||||            ||||||   ||||||||| || |  A
ATGAGGGAGGCAGGGTATAATTCACTG            TTTATA   TACATAGAT TG G  
                           -----------C      ATG         C  T AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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