SE2510480

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1710
  • Brachypodium distachyon
  • SE2510480
  • Tc1/Mariner
  • St31
  • Bd1:33054682-33054809
  • TA
  • TACTCCCTCCGATCCAAATTACATGTCGCAGCTTTGTGTCGATACGCGTGTATCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
             C       CA     C  C     G C   A            GACGCATT
TACTCCCTCCGAT CAAATTA  TGTCG AG TTTGT T GAT CGCGTGTATCTA        
||||||||||||| |||||||  ||||| || ||||| | ||| ||||||||||||         
ATGAGGGAGGCTA GTTTAAT  ACAGC TC AAACA A CTA GCGTACATAGAT        
             A       AA     A  T     G T   A            AGATTACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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