SE2510487

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1717
  • Brachypodium distachyon
  • SE2510487
  • Tc1/Mariner
  • St33
  • Bd3:8502668-8502794
  • TA
  • TACTCCCTCCAATCCATATTACTTCTC

Secondary structure and sequence

TSD    TIR
5'



3' 
          A             C  TCAAC        G    G      C   C  AATGA
TACTCCCTCC ATCCATATTACTT TC     TTTGTCTA ATAC TATGTG CTA AC     
|||||||||| ||||||||||||| ||     |||||||| |||| |||||| ||| ||      
ATGAGGGAGG TAGGTATAATGAA AG     GAACAGAT TATG GTACAT GAT TG     
          C             C  -CCTC        G    A      A   C  CACAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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