SE2510497

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1727
  • Brachypodium distachyon
  • SE2510497
  • Tc1/Mariner
  • St10
  • Bd1:40396585-40396701
  • TA
  • TACTCCCTCCGGCCGGAATTACTTGTCGAAATATTACATGTATCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
                A      -----------    G      TAC         GACGCTT
TACTCCCTCCGGCCGG ATTACT           TGTC AAATAT   ATGTATCTA       
|||||||||||||||| ||||||           |||| ||||||   |||||||||       T
ATGAGGGAGGCTGGCC TAATGA           ACGG TTTATG   TACATAGAT       
                A      ACATAGTTTAA    G      -CC         ACACATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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