SE2510532

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1762
  • Brachypodium distachyon
  • SE2510532
  • Tc1/Mariner
  • St10
  • Bd2:45124545-45124661
  • TA
  • TACTCCCTCCGACCGGTATTACTTGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
           A    T          TCAAAT    CCAAATACAG         TG   AA
TACTCCCTCCG CCGG ATTACTTGTC      TTGC          ATGTATCTA  TGT  
||||||||||| |||| ||||||||||      ||||          |||||||||  |||  A
ATGAGGGAGGC GGCC TAATGAACAG      AATG          TACATAGAT  GCG  
           C    T          CTTTAT    ----------         CT   AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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