Plant MITE

SE2510575

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_1805
Brachypodium distachyon
SE2510575
Tc1/Mariner
St10
Bd1:61071705-61071821
TA
TACTCCCTCCGTCTCATATTAAGTGAC

Secondary structure and sequence

TSD TIR

5'

3'

                           TCAAAT       AATATGGATGTATCTATA
TACTCCCTCCGTCTCATATTAAGTGAC      TTGCCCA                  
|||||||||||||||||||||||||||      |||||||                  C
ATGAGGGAGGCAGGGTATAATTCACTG      AATGTAC                  
                           CTTTAT       ATAGATCTGCGAAAAAAC

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510575

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510575