SE2530600

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1830
  • Brachypodium distachyon
  • SE2530600
  • hAT
  • Hat31
  • Bd1:51786269-51786449
  • ACCCTATG
  • CAGTGGCGGAGCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
ACCCTATG  G             -   AGTCTGTAGCCTAGGCACTTATGCTTAATTTTCATGATTTCGGTGATCTAACACCATCATAAT
        CA TGGCGGAGCCAGC TCA                                                               
        || ||||||||||||| |||                                                                
        GT GCCGCCTCGGTGG ACT                                                               
GTATCCCA  G             C   CCCGTGGTGCCCGTCCACGGGTCCGAAGGTCAAGGGCCGCCGCGTGGGGTTCCTTTTTGTCGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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