Plant MITE

SE2510608

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_1838
Brachypodium distachyon
SE2510608
Tc1/Mariner
St24
Bd1:68631148-68631233
TA
TACTCCCTCCGATCCATAATAAGTGTCGCTGATTTAGTATA

Secondary structure and sequence

TSD TIR

5'

3'

                            C   T        AA
TACTCCCTCCGATCCATAATAAGTGTCG TGA TTAGTATA  
|||||||||||||||||||||||||||| ||| ||||||||   
ATGAGGGAGGCTAGGTATTATTCACAGC ATT AATCATGT  
                            A   C        TG

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510608

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510608