SE2510642

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1872
  • Brachypodium distachyon
  • SE2510642
  • Tc1/Mariner
  • St10
  • Bd4:36468399-36468519
  • TA
  • TACTCCCTCCGTTCCATAATTCTTGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
        C    C      ----       TCAAAT    CCAAAAATGA      CTATTT TAAA
TACTCCCT CGTT CATAAT    TCTTGTC      TTGC          ATGTAT      C    
|||||||| |||| ||||||    |||||||      ||||          ||||||      |     
ATGAGGGA GCAA GTATTA    AGAACAG      AATG          TACATA      G    
        A    A      AGTA       CTTTAT    ----------      -AATCT TAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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