SE2510696

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1926
  • Brachypodium distachyon
  • SE2510696
  • Tc1/Mariner
  • St10
  • Bd3:53384653-53384768
  • TA
  • TACTCCCTCTGATCCTAAATT

Secondary structure and sequence

TSD    TIR
5'



3' 
                     CTTGACTCGAAT     -      -GA         TTTTTAA
TACTCCCTCTGATCCTAAATT            TTGTT AAATAT   ATGTATCTA       
|||||||||||||||||||||            ||||| ||||||   |||||||||       A
ATGAGGGAGGCTAGGATTTAA            AACAA TTTATA   TACATAGAT       
                     -----------C     C      ATG         CTGTGGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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