SE2510697

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1927
  • Brachypodium distachyon
  • SE2510697
  • Tc1/Mariner
  • St10
  • Bd2:47769937-47770053
  • TA
  • TACTCCCTCCGATCCATATTATTTGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
                           TCAAATTTGCCT      -GA        --      A
TACTCCCTCCGATCCATATTATTTGTC            AAATAT   ATGTATCT  ATGTTT 
|||||||||||||||||||||||||||            ||||||   ||||||||  |||||| A
ATGAGGGAGGCTAGGTATAATGAACAG            TTTATA   TACATAGA  TGCGGA 
                           -----------C      ATG        TC      A
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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