Plant MITE

SE2510723

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_1953
Brachypodium distachyon
SE2510723
Tc1/Mariner
St10
Bd5:13324649-13324765
TA
TACTCCCTCCGACCCATATTACTTGTC

Secondary structure and sequence

TSD TIR

5'

3'

           A  CAT          TCAAAT       AATATGGATGTATCTATG
TACTCCCTCCG CC   ATTACTTGTC      TTGCCCA                  
||||||||||| ||   ||||||||||      |||||||                  T
ATGAGGGAGGC GG   TAATGAACAG      AATGTAC                  
           C  CCT          CTTTAT       ATAGATCTGTGAAAAATT

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510723

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510723