SE2510729

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1959
  • Brachypodium distachyon
  • SE2510729
  • Tc1/Mariner
  • St16
  • Bd4:45818143-45818255
  • TA
  • TACTCCCTCCGTCCAACTTTCACTAAATTTGAATGCATCTATACA

Secondary structure and sequence

TSD    TIR
5'



3' 
                 --------     -------CT       A   C     T   CTAA
TACTCCCTCCGTCCAAC        TTTCA         AAATTTG ATG ATCTA ACA    
|||||||||||||||||        |||||         ||||||| ||| ||||| |||     
ATGAGGGAGGCAGGTTG        AGAGT         TTTAAAC TAC TAGAT TGT    
                 TTTTCTAC     TCAAACAAT       C   A     C   ACTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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