SE2510749

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1979
  • Brachypodium distachyon
  • SE2510749
  • Tc1/Mariner
  • St56
  • Bd1:32583609-32583848
  • TA
  • TACTCCCTCCGTCTCTCTTTACCAGGCGTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
         C    CTC               ----AT  -    AGCCCAGTCCATTTATAAGAGGCGTATTGATTTTTTGGCATTAAAGTATCCAGCTTTCTCTCAGACAACCTCATGCG
TACTCCCTC GTCT   TTTACCAGGCGTTTT      TT GAGC                                                                             
||||||||| ||||   |||||||||||||||      || ||||                                                                             A
ATGAGGGAG CAGG   AAATGGTCCGCAAAA      CA TGAC                                                                             
         A    TAA               CCAGAA  G    CATGATTCCGTCGGTGCCCTCAAACGAAAAACTGGTTTGATGGGTGATTTGCACACGGGTGGGTTCCGTGACGGGTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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