Plant MITE

SE2510760

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_1990
Brachypodium distachyon
SE2510760
Tc1/Mariner
St27
Bd1:68244999-68245084
TA
TACTCCCTCCGGCCGGAATTACTTGTCGTTGATTTAGTA

Secondary structure and sequence

TSD TIR

5'

3'

                             T         CAAC
TACTCCCTCCGGCCGGAATTACTTGTCGT GATTTAGTA    
||||||||||||||||||||||||||||| |||||||||     
ATGAGGGAGGCCGGCCTTAATGAACAGCG CTAAATCAT    
                             T         CTTT

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510760

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510760