Plant MITE

SE2510777

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_2007
Brachypodium distachyon
SE2510777
Tc1/Mariner
St10
Bd2:14266096-14266212
TA
TACTCCCTCCGTCCCATATTAAGTGAC

Secondary structure and sequence

TSD TIR

5'

3'

                           TCAAATTTGCTC      - G         T  C AA
TACTCCCTCCGTCCCATATTAAGTGAC            AAATAT G ATGTATCTA AC C  
|||||||||||||||||||||||||||            |||||| | ||||||||| || |  A
ATGAGGGAGGCAGGGTATAATTCACTG            TTTATA T TACATAGAT TG G  
                           -----------C      A G         C  C AA

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510777

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510777