Plant MITE

SE2510793

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_2023
Brachypodium distachyon
SE2510793
Tc1/Mariner
St10
Bd4:37120655-37120771
TA
TACTCCCTCCGTCCCATATTAAGTGCCGAAATATTACATTTATCTAGACGCT

Secondary structure and sequence

TSD TIR

5'

3'

                T        ------------  G      TA   T     AG  G  TT
TACTCCCTCCGTCCCA ATTAAGTG            CC AAATAT  CAT TATCT  AC CT  
|||||||||||||||| ||||||||            || ||||||  ||| |||||  || ||   
ATGAGGGAGGCAGGGT TAATTCAC            GG TTTATA  GTA ATAGA  TG GA  
                T        TGAATTTAAACA  -      -C   C     CA  -  TT

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510793

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510793