SE2510794

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2024
  • Brachypodium distachyon
  • SE2510794
  • Tc1/Mariner
  • St16
  • Bd1:71295094-71295220
  • TA
  • TACTCCCTCCGTCCAACAAAAGATGTCTCAACTTTGATTAAGTTTGAATGCATCTATACA

Secondary structure and sequence

TSD    TIR
5'



3' 
                    A          C    ATT       A   C     T   CTAA
TACTCCCTCCGTCCAACAAA GATGTCTCAA TTTG   AAGTTTG ATG ATCTA ACA    
|||||||||||||||||||| |||||||||| ||||   ||||||| ||| ||||| |||     
ATGAGGGAGGCAGGTTGTTT CTACAGAGTT AAAC   TTTAAAC TAC TAGAT TGT    
                    -          C    AGT       C   A     C   ACTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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