SE2510817

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2047
  • Brachypodium distachyon
  • SE2510817
  • Tc1/Mariner
  • St45
  • Bd5:13561378-13561495
  • TA
  • TACTCCCTCCGTCCCATATTAAGTGACTTCCTATTACATGTATCTAAACATAT

Secondary structure and sequence

TSD    TIR
5'



3' 
                             -------C   -T   --         AAC    TT
TACTCCCTCCGTCCCATATTAAGTGACTT        CTA  TAC  ATGTATCTA   ATAT  
|||||||||||||||||||||||||||||        |||  |||  |||||||||   ||||   
ATGAGGGAGGCAGGGTATAATTCACTGAG        GAT  ATG  TGCATAGAT   TATG  
                             TTTAAATA   TT   CC         --A    AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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