SE2510819

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_2049
  • Brachypodium distachyon
  • SE2510819
  • Tc1/Mariner
  • St16
  • Bd5:2252588-2252715
  • TA
  • TACTCCCTCCGTCCAACAAAAGATGTCTCAAGTTTGTCAAAATTTGGATGTATCTAGACAT

Secondary structure and sequence

TSD    TIR
5'



3' 
    C               A          G    T A                 G    GAC
TACT CCTCCGTCCAACAAA GATGTCTCAA TTTG C AAATTTGGATGTATCTA ACAT   
|||| ||||||||||||||| |||||||||| |||| | ||||||||||||||||| ||||    
ATGA GGAGGCAGGTTGTTT CTACAGAGTT AAAC G TTTAAACTTACGTAGAT TGTG   
    A               C          G    T A                 A    ATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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